Racmacs - Antigenic Cartography Macros
A toolkit for making antigenic maps from immunological assay data, in order to quantify and visualize antigenic differences between different pathogen strains as described in Smith et al. (2004) <doi:10.1126/science.1097211> and used in the World Health Organization influenza vaccine strain selection process. Additional functions allow for the diagnostic evaluation of antigenic maps and an interactive viewer is provided to explore antigenic relationships amongst several strains and incorporate the visualization of associated genetic information.
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openblascppopenmp
8.13 score 24 stars 371 scripts 452 downloadsr3js - 'WebGL'-Based 3D Plotting using the 'three.js' Library
Provides R and 'JavaScript' functions to allow 'WebGL'-based 3D plotting using the 'three.js' 'JavaScript' library. Interactivity through roll-over highlighting and toggle buttons is also supported.
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3d-graphicsplotting
6.09 score 14 stars 58 scripts 384 downloadsrmarchingcubes - Calculate 3D Contour Meshes Using the Marching Cubes Algorithm
A port of the C++ routine for applying the marching cubes algorithm written by Thomas Lewiner et al. (2012) <doi:10.1080/10867651.2003.10487582> into an R package. The package supplies the contour3d() function, which takes a 3-dimensional array of voxel data and calculates the vertices, vertex normals, and faces for a 3d mesh representing the contour(s) at a given level.
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openblascpp
6.03 score 8 stars 2 dependents 45 scripts 664 downloads