Racmacs - Antigenic Cartography Macros

A toolkit for making antigenic maps from immunological assay data, in order to quantify and visualize antigenic differences between different pathogen strains as described in Smith et al. (2004) <doi:10.1126/science.1097211> and used in the World Health Organization influenza vaccine strain selection process. Additional functions allow for the diagnostic evaluation of antigenic maps and an interactive viewer is provided to explore antigenic relationships amongst several strains and incorporate the visualization of associated genetic information.

Last updated 9 months ago

openblascppopenmp

8.06 score 21 stars 362 scripts 250 downloads

r3js - 'WebGL'-Based 3D Plotting using the 'three.js' Library

Provides R and 'JavaScript' functions to allow 'WebGL'-based 3D plotting using the 'three.js' 'JavaScript' library. Interactivity through roll-over highlighting and toggle buttons is also supported.

Last updated 4 months ago

3d-graphicsplotting

5.99 score 14 stars 47 scripts 296 downloads

rmarchingcubes - Calculate 3D Contour Meshes Using the Marching Cubes Algorithm

A port of the C++ routine for applying the marching cubes algorithm written by Thomas Lewiner et al. (2012) <doi:10.1080/10867651.2003.10487582> into an R package. The package supplies the contour3d() function, which takes a 3-dimensional array of voxel data and calculates the vertices, vertex normals, and faces for a 3d mesh representing the contour(s) at a given level.

Last updated 4 years ago

openblascpp

5.73 score 8 stars 1 dependents 45 scripts 281 downloads